Recent updates in the R Markdown family Dec 8, 2020 8:30 PM — 10:00 PM Online meetup. When you have finished the registration process click the button “Start a project”. The R package blogdown is an incredibly powerful tool—it allows R users with little to no familiarity in web development to build a fully functional, content-oriented, beautiful website using a language they’re already familiar with. Academic makes it easy! In Hugo, themes control the entire appearance and functionality of your site. Academic Scripts: Scripts to help migrate content to new versions of Academic James E. Pustejovsky. Some Hugo templates I considered: Learn: This a great and simple theme. Blog and projects for Mike Mahoney, made via blogdown and using the hugo Academic theme: Thomas Roh's Blog: A blog covering R, Web Development, Operations Research, Industrial Engineering, and Statistics: Rahul's Personal Blog on Stats & ML: Hacking through stats & ML using R. Leo Van's Blog : Leo Van (Fan Yeliang), dark data explorer. As suggested in the blogdown book, modifying the Hugo theme directly is probably not a good idea. As an academic, it was natural to use the Academic theme. Alison Hill. Again, Blogdown is a new package for R and RStudio that helps you to create blog posts and other types of web content using the RMarkdown language. This was all going well until I tried to change the project information. I opted for the Hugo academic theme mainly based on Yihui and Amber’s recommendation- it was great advice. Look into the documentation to se… Additionally: 1. If his/her repo was not updated for several months or later I would not choose this theme. The tutorial is more general and intended for new blogdown learners, and is not specific to any one Hugo theme choice. Look if the author is currently active. Academic Theme Documentation (if your going to use the academic theme) Making a Website Using Blogdown, Hugo, and GitHub pages. 4. The showcase section is also a good indication of what may be achieved. Create an Academic website with R Blogdown, Netlify and github. Build anything with the Page Builder - over 50 widgets , themes , and language packs included! As an academic, it was natural to use the Academic theme. Restart the blogdown server with blogdown::serve_site(). Themes. Once you review the above material you should have a pretty firm grasp on how to get the ball rolling. This way you can have more trust in the theme’s responding to Hugo changes and to bug reports. Learn more. And believe it or not, I have never had a website! This is less a tutorial, and more a concatenation of tutorials for individuals who: Want to create a hugo website using the Academic theme. Making a Website with Blogdown. This is where you can list your academic interests, your education/degrees, and write a brief bio for yourself. The academic theme allows you to use both Font Awesome icons as well as Academicons to you can link to all of the things! The best advice I ever got in graduate school was “Progress not perfection.” At some point, you need to transition into get-it-out-the-door mode. I have chosen the hugo-academic theme. As the blogdown book mentions, also look at the theme’s popularity and activity before adopting it. In the “Hugo theme” field you have to insert the URL of the GitHub repository of the theme you would like to use. So instead I copied the themes/hugo-lithium-theme/layouts and themes/hugo-lithium-theme/static folders to the main directory of the site and edited those. Now, you’ll have to know when the theme gets updated. hostname: Where to find the theme. Jesse Islam. After almost one year of interruption, I started re-using blogdown again. After doing these 3 things, your site should be shaping up pretty nicely, and then you can start digging deeper into that content folder and refining your content. The academic theme offers a way to link to a custom CSS in the config.toml file, and this is a nice way to make your site look unique by changing simple elements like colors and fonts. After leading a workshop on making websites in blogdown (demonstrating how to install blogdown, install a theme etc), I couldn’t get my website to build anymore. My research focuses on autism, and I teach graduate-level courses in OHSU’s Computer Science education program. Here I wanted to provide some details for academics who want to get started. After exploring some alternatives, like Shirin’s (with Jekyll), and Amber Thomas advice (which involved Git skills beyond my basic abilities), I was able to install Yihui’s hugo-lithium-theme in a new repository. You’ll get the quickest pay-off by adding your avatar photo to your static/img folder, then editing the config.toml. I’m really happy with my new site, and you can view the source content on GitHub. You could go hardcore git and make the theme a git submodule of your website repo. Instead of tracking down the errors (pretty sure updates in the theme didn’t play nicely with some of the hacky work arounds I had added), I decided to start from scratch and just copy over the content files and it worked well! Most blog posts, even elaborate ones, don’t have that many code chunks or figures, and manually copying and adjusting the markdown code takes much less time than writing the blog post in the first place. By default, blogdown proposes the hugo-lithium theme, Yihui Xie’s minimal example. I also have developed and led several R workshops and smaller team-based training sessions, and love to train new “useRs”. slides code video See all talks … James E. Pustejovsky. Last updated on Mar 4, 2020 3 min read Webdev, Resource. In part 1 we have installed the hugo-academic theme on top of R, RStudio and blogdown. The tutorial is more general and intended for new blogdown learners, and is not specific to any one Hugo theme choice. You can think through what your needs are, and filter by different characteristics. Disclaimer. Technical support and news about rbind.io, Data Science Blog: My Experiences with Data Science, Blogging, and R, Thoughts to Words - An Introduction to Aaron Simumba's Website, Building an academic website using blogdown. Choosing a Hugo Theme and Making some Minor Changes. You can find themes with rich user documentation under the tag documentation, check here. The latest release of the blogdown package (not yet on CRAN) includes new checking functions to help users make less breakable Hugo sites. library(blogdown) install_hugo() new_site() Blogdown will generate the necessary file structure within your directory and populate some example files as well as CSS files for the theme. The process was very smooth if you link it up with your GitHub repository from the start. 1. The blogdown package made the conversion fairly straighforward, but I still had to spend some time figuring out how to work with this Hugo theme. By default, this will download the most updated theme version for you 1. An update on code folding with blogdown + Academic theme. 2. This is important if you (like me) are still not comfortable with Git/Github and instead of forking and synchronizing repos are preferring to install updates via ZIP files. Look at the repo to decide if the author is responsive to reported issues or pull requests (PRsin developer speech). If theme = NA, no themes will be installed, and you have to manually install a theme. blogdown::new_site() # default theme is lithium If you want a theme other than the default, you can specify the theme at the same time as you call the new_site function: # for example, create a new site with the academic theme blogdown::new_site(theme = "gcushen/hugo-academic", theme_example = … The brilliant thing about using blogdown is that, if you are already an RStudio user, it will be that much easier for you to keep your website up to date. You can check out my custom css to see how I customized the academic theme, which I based off of this gist. blogdown with Academic Theme. I am doing this from within RStudio and was editing the example hugo-academic website and using the 'serve site' addin. Finally, my advice to students when they are learning ggplot2 is to play with the default settings, and I have the same advice for your blogdown site. 3. Choose a beautiful template, color theme, and font. theme… Thanks to Allen O’Brien for pointing out a bug in the codefolding code, which led to the last code chunk defaulting to hidden rather than open. This theme is suitable for those who prefer minimal styles, and want to build a website with a few pages and some blog posts. 11 The complete list of themes is at https://themes.gohugo.io/. At the time of this post’s writing, it has 8 functions: build_site(): Compiles all .Rmd files into Hugo-readable HTML & builds the site html_page(): Renders .Rmd file into Hugo-readable HTML It is definitely a work in progress, so check back in with me! 2017/06/16 Building an academic website using blogdown Alison Presmanes Hill ›› Alison’s overview for personalizing the hugo-academic-theme; 2017/05/29 Romain’s site with blogdown, hugo, rbind Romain François ›› Some details about how Romain converted his website to blogdown; 2017/05/29 Welcome to ewenme (you-n-me) A dynamic CV. I am creating my first attempt at a blogdown website using the hugo-academic theme. 2019-04-14 2020-05-03 This post describes an implementation of code folding for an older version of the Academic Theme. Would like to make use of R markdown, github and google domains. I wrote up my detailed notes about how to get up and running using blogdown + GitHub + Netlify, so I would suggest that you start there! This was way overdue, so when I saw blogdown, I decided I had no excuses left since I could now do everything from the comfort of RStudio. Hosted on netlify. I opted for the Hugo academic theme mainly based on Yihui and Amber’s recommendation- it was great advice. Work fast with our official CLI. Blogdown. Using themes with blogdown: Lesson learned. Academic Kickstart provides a minimal template to kickstart your new website. I opted to use Netlify for deployment based on Yihui and Amber’s recommendation again. Look if the author provides releases from time to time. - libjohn/blogdown-libjohn It does not work with Academic 4.+. If nothing happens, download the GitHub extension for Visual Studio and try again. The blogdown R package Finally, -after 24h of failed attempts-, I could get my favourite Hugo theme up and running with R Studio and Blogdown. I am creating my first attempt at a blogdown website using the hugo-academic theme. The theme offers all the sections present in a standard curriculum vitae with a clean simple interface. The blogdown package made the conversion fairly straighforward, but I still had to spend some time figuring out how to work with this Hugo theme. Next, edit your about.md page, which is in the content/home folder. You can also specify the full URL of the zip file or tarball in theme, in which case this argument is ignored. Last updated on Dec 28, 2020 10 min read See all posts Talks / Workshops. I’m not entirely sure if this is the best way to do things but that’s what I gathered from the Custom Layouts section of the blogdown … Defaults to github.com; specify if you wish to use an instance of GitHub Enterprise. The download. If nothing happens, download Xcode and try again. How? Blogdown tutorial (Part 2) Creating a Github repository. Check out the latest demo of what you'll get in less than 10 minutes, or view the showcase. Configure the directory name and path, and the hugo theme is gcushen/hugo-academic. Your theme will give your blog some flavour and will help to organise it depending on your purpose. In RStudio, click Project -> New Project -> New Directory -> Website using blogdown. 2.4.1 The default theme The default theme in blogdown, hugo-lithium, is hosted on GitHub at https://github.com/yihui/hugo-lithium. You can pick your own preferred webdesign via the Hugo Themes page. Why Blogdown? This theme is perfect if you are faculty or a graduate student, or even a wannabe graduate student applying to masters or PhD programs. I’m excited to have one place to start sharing my workshops and teaching materials. This was all going well until I tried to change the project information. So, if you care a lot about the appearance of your website, you will probably spend quite a bit of time in the beginning looking for a Hugo theme that you like from the collection listed at https://themes.gohugo.io.Please note that not all themes have been tested against blogdown. Create a website using Hugo and blogdown. In case you do not have a GitHub account, sign up for it. Using hugo academic theme and blogdown to create a personal website for libjohn. Here I wanted to provide some details for academics who want to get started. If nothing happens, download GitHub Desktop and try again. I am doing this from within RStudio and was editing the example hugo-academic website and using the 'serve site' addin. 1.6 Other themes. This theme allows you to flexibly highlight and document these important contributions. Use Git or checkout with SVN using the web URL. We will continue the installation process with creating a remote GitHub repository. If you are an academic, you probably know that although publications are king for promotions and getting grants, you do a lot of work that is “extracurricular” like mentoring, service, and teaching. download the GitHub extension for Visual Studio, Decorate your laptop or journal with an Academic, install on your computer by downloading the. Code folding with blogdown + Academic theme. Last updated on 2020-11-21 UPDATED November 21, 2020. One of the biggest hurdles I had was creating my site with the Hugo Academic Theme. Academic Admin: An admin tool to import publications from BibTeX or import assets for an offline site 2. You can choose from one of the following four methods to install: You signed in with another tab or window. But instead of writing new content, I had to struggle once again using the sophisticated machinery of Hugo and my academic-theme.With painful experiences, I learned that one has to be cautious with updates to prevent breaking changes. An important step in setting up your site that will be generated via Hugo is choosing a Theme - i.e., a template that you’ll adjust and feed your content into for rendering. Academic makes it easy to create a beautiful website for free using Markdown, Jupyter, or RStudio. You can always make changes later. It was originally written by Jonathan Rutheiser, and I have made several changes to it. Unbreak your blogdown site. I am a professor of pediatrics in Oregon Health & Science University’s Center for Spoken Language Understanding. Huge variety of Hugo themes to choose from. Add your contact information, academic affiliations, and links to all of your social networks. Check out the latest demos of what you'll get in less than 10 minutes, or view the showcase of personal, project, and business sites. This may seem like a lot of steps and a lot of fiddling, but it’s really not that bad once you get the hang of it. See my updated instructions to get it working with newer versions of Academic. Customize anything on your site with widgets, themes, and language packs. Creating an ‘Academic Themed’ website with blogdown and Hugo A companion guide to Dan Quintana’s thread Gina Reynolds 9/10/2019. Contribute to melindahiggins2000/blogdownAcademic development by creating an account on GitHub. And using the 'serve site ' addin new site, and filter by different characteristics theme ’ s responding Hugo... When you have to know when the theme gets updated was natural to use instance! 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